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To understand patterns in CO2 partial pressure (PCO2) over time in wetlands’ surface water and porewater, we examined the relationship between PCO2 and land–atmosphere flux of CO2 at the ecosystem scale at 22 Northern Hemisphere wetland sites synthesized through an open call. Sites spanned 6 major wetland types (tidal, alpine, fen, bog, marsh, and prairie pothole/karst), 7 Köppen climates, and 16 different years. Ecosystem respiration (Reco) and gross primary production (GPP), components of vertical CO2 flux, were compared to PCO2, a component of lateral CO2 flux, to determine if photosynthetic rates and soil respiration consistently influence wetland surface and porewater CO2 concentrations across wetlands. Similar to drivers of primary productivity at the ecosystem scale, PCO2 was strongly positively correlated with air temperature (Tair) at most sites. Monthly average PCO2 tended to peak towards the middle of the year and was more strongly related to Reco than GPP. Our results suggest Reco may be related to biologically driven PCO2 in wetlands, but the relationship is site-specific and could be an artifact of differently timed seasonal cycles or other factors. Higher levels of discharge do not consistently alter the relationship between Reco and temperature normalized PCO2. This work synthesizes relevant data and identifies key knowledge gaps in drivers of wetland respiration. 

Permafrost degradation in peatlands is altering vegetation and soil properties and impacting net carbon storage. We studied four adjacent sites in Alaska with varied permafrost regimes, including a black spruce forest on a peat plateau with permafrost, two collapse scar bogs of different ages formed following thermokarst, and a rich fen without permafrost. Measurements included year‐round eddy covariance estimates of net carbon dioxide (CO₂), mid‐April to October methane (CH₄) emissions, and environmental variables. From 2011 to 2022, annual rainfall was above the historical average, snow water equivalent increased, and snow‐season duration shortened due to later snow return. Seasonally thawed active layer depths also increased. During this period, all ecosystems acted as slight annual sources of CO₂(13–59 g C m⁻² year⁻¹) and stronger sources of CH₄(11–14 g CH₄ m⁻²from ~April to October). The interannual variability of net ecosystem exchange was high, approximately ±100 g C m⁻² year⁻¹, or twice what has been previously reported across other boreal sites. Net CO₂release was positively related to increased summer rainfall and winter snow water equivalent and later snow return. Controls over CH₄emissions were related to increased soil moisture and inundation status. The dominant emitter of carbon was the rich fen, which, in addition to being a source of CO₂, was also the largest CH₄emitter. These results suggest that the future carbon‐source strength of boreal lowlands in Interior Alaska may be determined by the area occupied by minerotrophic fens, which are expected to become more abundant as permafrost thaw increases hydrologic connectivity. Since our measurements occur within close proximity of each other (≤1 km²), this study also has implications for the spatial scale and data used in benchmarking carbon cycle models and emphasizes the necessity of long‐term measurements to identify carbon cycle process changes in a warming climate.

 

Abstract. Peatlands have often been neglected in Earth system models (ESMs).Where they are included, they are usually represented via a separate, prescribed grid cell fraction that is given the physical characteristics of a peat (highly organic) soil. However, in reality soils vary on a spectrum between purely mineral soil (no organic material) and purely organicsoil, typically with an organic layer of variable thickness overlying mineral soil below. They are also dynamic, with organic layer thickness and its properties changing over time. Neither the spectrumof soil types nor their dynamic nature can be captured by current ESMs. Here we present a new version of an ESM land surface scheme (Joint UK Land Environment Simulator, JULES) where soil organic matter accumulation – and thus peatland formation, degradation and stability – is integratedin the vertically resolved soil carbon scheme. We also introduce the capacity to track soil carbon age as a function of depth in JULES and compare this to measured peat age–depth profiles. The new scheme is tested and evaluated at northern and temperate sites. This scheme simulates dynamic feedbacks between the soil organic material and its thermal and hydraulic characteristics. We show that draining the peatlands can lead to significant carbon loss, soil compaction and changes in peat properties. However, negative feedbacks can lead to the potential for peatlands to rewet themselves following drainage.These ecohydrological feedbacks can also lead to peatlands maintaining themselves in climates where peat formation would not otherwise initiate in the model, i.e. displaying some degree of resilience. The new model produces similar results to the original model for mineral soils and realistic profiles of soil organic carbon for peatlands.We evaluate the model against typical peat profiles based on 216 northern and temperate sites from a global dataset of peat cores.The root-mean-squared error (RMSE) in the soil carbon profile is reduced by 35 %–80 % in the best-performing JULES-Peat simulationscompared with the standard JULES configuration. The RMSE in these JULES-Peat simulations is 7.7–16.7 kg C m−3 depending on climate zone, which is considerably smaller than the soil carbon itself (around 30–60 kg C m−3). The RMSE at mineral soil sites is also reducedin JULES-Peat compared with the original JULES configuration (reduced by ∼ 30 %–50 %). Thus, JULES-Peat can be used as a complete scheme that simulates both organic and mineral soils. It does not requireany additional input data and introduces minimal additional variables to the model. This provides a new approach for improving the simulation of organic and peatland soils andassociated carbon-cycle feedbacks in ESMs. 

Abstract. In the global methane budget, the largest natural sourceis attributed to wetlands, which encompass all ecosystems composed ofwaterlogged or inundated ground, capable of methane production. Among them,northern peatlands that store large amounts of soil organic carbon have beenfunctioning, since the end of the last glaciation period, as long-termsources of methane (CH4) and are one of the most significant methanesources among wetlands. To reduce uncertainty of quantifying methane flux in theglobal methane budget, it is of significance to understand the underlyingprocesses for methane production and fluxes in northern peatlands. A methanemodel that features methane production and transport by plants, ebullitionprocess and diffusion in soil, oxidation to CO2, and CH4 fluxes tothe atmosphere has been embedded in the ORCHIDEE-PEAT land surface modelthat includes an explicit representation of northern peatlands.ORCHIDEE-PCH4 was calibrated and evaluated on 14 peatland sites distributedon both the Eurasian and American continents in the northern boreal andtemperate regions. Data assimilation approaches were employed to optimizedparameters at each site and at all sites simultaneously. Results show thatmethanogenesis is sensitive to temperature and substrate availability overthe top 75 cm of soil depth. Methane emissions estimated using single siteoptimization (SSO) of model parameters are underestimated by 9 g CH4 m−2 yr−1 on average (i.e., 50 % higher than the site average ofyearly methane emissions). While using the multi-site optimization (MSO),methane emissions are overestimated by 5 g CH4 m−2 yr−1 onaverage across all investigated sites (i.e., 37 % lower than the siteaverage of yearly methane emissions). 

Abstract Despite the importance of high-latitude surface energy budgets (SEBs) for land-climate interactions in the rapidly changing Arctic, uncertainties in their prediction persist. Here, we harmonize SEB observations across a network of vegetated and glaciated sites at circumpolar scale (1994–2021). Our variance-partitioning analysis identifies vegetation type as an important predictor for SEB-components during Arctic summer (June-August), compared to other SEB-drivers including climate, latitude and permafrost characteristics. Differences among vegetation types can be of similar magnitude as between vegetation and glacier surfaces and are especially high for summer sensible and latent heat fluxes. The timing of SEB-flux summer-regimes (when daily mean values exceed 0 Wm −2 ) relative to snow-free and -onset dates varies substantially depending on vegetation type, implying vegetation controls on snow-cover and SEB-flux seasonality. Our results indicate complex shifts in surface energy fluxes with land-cover transitions and a lengthening summer season, and highlight the potential for improving future Earth system models via a refined representation of Arctic vegetation types. 

Soil respiration (i.e. from soils and roots) provides one of the largest global fluxes of carbon dioxide (CO₂) to the atmosphere and is likely to increase with warming, yet the magnitude of soil respiration from rapidly thawing Arctic-boreal regions is not well understood. To address this knowledge gap, we first compiled a new CO₂flux database for permafrost-affected tundra and boreal ecosystems in Alaska and Northwest Canada. We then used the CO₂database, multi-sensor satellite imagery, and random forest models to assess the regional magnitude of soil respiration. The flux database includes a new Soil Respiration Station network of chamber-based fluxes, and fluxes from eddy covariance towers. Our site-level data, spanning September 2016 to August 2017, revealed that the largest soil respiration emissions occurred during the summer (June–August) and that summer fluxes were higher in boreal sites (1.87 ± 0.67 g CO₂–C m⁻²d⁻¹) relative to tundra (0.94 ± 0.4 g CO₂–C m⁻²d⁻¹). We also observed considerable emissions (boreal: 0.24 ± 0.2 g CO₂–C m⁻²d⁻¹; tundra: 0.18 ± 0.16 g CO₂–C m⁻²d⁻¹) from soils during the winter (November–March) despite frozen surface conditions. Our model estimates indicated an annual region-wide loss from soil respiration of 591 ± 120 Tg CO₂–C during the 2016–2017 period. Summer months contributed to 58% of the regional soil respiration, winter months contributed to 15%, and the shoulder months contributed to 27%. In total, soil respiration offset 54% of annual gross primary productivity (GPP) across the study domain. We also found that in tundra environments, transitional tundra/boreal ecotones, and in landscapes recently affected by fire, soil respiration often exceeded GPP, resulting in a net annual source of CO₂to the atmosphere. As this region continues to warm, soil respiration may increasingly offset GPP, further amplifying global climate change.

 

Abstract. Past efforts to synthesize and quantify the magnitude and change in carbon dioxide (CO2) fluxes in terrestrial ecosystems across the rapidly warming Arctic–boreal zone (ABZ) have provided valuable information but were limited in their geographical and temporal coverage. Furthermore, these efforts have been based on data aggregated over varying time periods, often with only minimal site ancillary data, thus limiting their potential to be used in large-scale carbon budget assessments. To bridge these gaps, we developed a standardized monthly database of Arctic–boreal CO2 fluxes (ABCflux) that aggregates in situ measurements of terrestrial net ecosystem CO2 exchange and its derived partitioned component fluxes: gross primary productivity and ecosystem respiration. The data span from 1989 to 2020 with over 70 supporting variables that describe key site conditions (e.g., vegetation and disturbance type), micrometeorological and environmental measurements (e.g., air and soil temperatures), and flux measurement techniques. Here, we describe these variables, the spatial and temporal distribution of observations, the main strengths and limitations of the database, and the potential research opportunities it enables. In total, ABCflux includes 244 sites and 6309 monthly observations; 136 sites and 2217 monthly observations represent tundra, and 108 sites and 4092 observations represent the boreal biome. The database includes fluxes estimated with chamber (19 % of the monthly observations), snow diffusion (3 %) and eddy covariance (78 %) techniques. The largest number of observations were collected during the climatological summer (June–August; 32 %), and fewer observations were available for autumn (September–October; 25 %), winter (December–February; 18 %), and spring (March–May; 25 %). ABCflux can be used in a wide array of empirical, remote sensing and modeling studies to improve understanding of the regional and temporal variability in CO2 fluxes and to better estimate the terrestrial ABZ CO2 budget. ABCflux is openly and freely available online (Virkkala et al., 2021b, https://doi.org/10.3334/ORNLDAAC/1934). 

Abstract. Plant transpiration links physiological responses ofvegetation to water supply and demand with hydrological, energy, and carbonbudgets at the land–atmosphere interface. However, despite being the mainland evaporative flux at the global scale, transpiration and its response toenvironmental drivers are currently not well constrained by observations.Here we introduce the first global compilation of whole-plant transpirationdata from sap flow measurements (SAPFLUXNET, https://sapfluxnet.creaf.cat/, last access: 8 June 2021).We harmonized and quality-controlled individual datasets supplied bycontributors worldwide in a semi-automatic data workflow implemented in theR programming language. Datasets include sub-daily time series of sap flowand hydrometeorological drivers for one or more growing seasons, as well asmetadata on the stand characteristics, plant attributes, and technicaldetails of the measurements. SAPFLUXNET contains 202 globally distributeddatasets with sap flow time series for 2714 plants, mostly trees, of 174species. SAPFLUXNET has a broad bioclimatic coverage, withwoodland/shrubland and temperate forest biomes especially well represented(80 % of the datasets). The measurements cover a wide variety of standstructural characteristics and plant sizes. The datasets encompass theperiod between 1995 and 2018, with 50 % of the datasets being at least 3 years long. Accompanying radiation and vapour pressure deficit data areavailable for most of the datasets, while on-site soil water content isavailable for 56 % of the datasets. Many datasets contain data for speciesthat make up 90 % or more of the total stand basal area, allowing theestimation of stand transpiration in diverse ecological settings. SAPFLUXNETadds to existing plant trait datasets, ecosystem flux networks, and remotesensing products to help increase our understanding of plant water use,plant responses to drought, and ecohydrological processes. SAPFLUXNET version0.1.5 is freely available from the Zenodo repository (https://doi.org/10.5281/zenodo.3971689; Poyatos et al., 2020a). The“sapfluxnetr” R package – designed to access, visualize, and processSAPFLUXNET data – is available from CRAN.